Linux temps réel embarqué et outils de développements Technique


poa Partial Order Alignment for multiple sequence alignment
Installed size 184
Maintainer Debian-Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Architecture i386
Version 2.0+20060928-1
Depends libc6 (>= 2.3.6-6)
Suggests magicfilter | apsfilter
File name pool/main/p/poa/poa_2.0+20060928-1_i386.deb
Description POA is Partial Order Alignment, a fast program for multiple sequence alignment (MSA) in bioinformatics. Its advantages are speed, scalability, sensitivity, and the superior ability to handle branching / indels in the alignment. Partial order alignment is an approach to MSA, which can be combined with existing methods such as progressive alignment. POA optimally aligns a pair of MSAs and which therefore can be applied directly to progressive alignment methods such as CLUSTAL. For large alignments, Progressive POA is 10-30 times faster than CLUSTALW. POA is published in Bioinformatics. 2004 Jul 10;20(10):1546-56. . Homepage: http://www.bioinformatics.ucla.edu/poa

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